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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NAS36_CAEBR
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRFCRLLFL NSLLSISICK AQNPAHLVAD EFKEHFNVEE KQLETVEELL LKMKKLAHSR  60
   61 SFAGREFGHD AVEDSKKEVA ISTQQGTIDK KVSPFLFEGD IFLSRRQAVD ILKALSKDKT 120
  121 KRLRRSFVSD KTATWKSLPI KYRFHESIDF YTISQIIAAI RFWEDSTCIT FENVSDAPVG 180
  181 DYIEFFSGQG CYSMIGRNGG RQGISIGESC MGVIEHEIGH ALGLWHEQSR PDALGYVSIE 240
  241 RDFILPSYIS DFLQRDDEID TLGIPYDLGS VMHYGSTAFS VDQKSKTVVT RDSLYQQTIG 300
  301 QREKLSFYDV ATINTAYCKE ECKSEKTECE YGGYMRPSKC SECLCPDGLG GEKCEKNEDA 360
  361 KNAECGGILE LSDEWKTIES PNYPDPGYEA DQKCSWLLKA PKGKRVEIEF IEDFSFLCTS 420
  421 TCVDFVELKI SDDLRNTGFR FCCYDKPEIS FVSQIDTAIV IFRSQLSADI GFKIQVRSTE 480
  481 SEPRTTIAPT IITTTMAPIT VDTPNVWADW GEWSMCSRTC GGCGIRSRVR SCRSKKCEGR 540
  541 RQEFGTCNLK ACPVDKHCAK LLSNNRLCNG KVCTKNDIAI SSCDAPQCCP PFVNVDGMCQ 600
  601 SDQENHHDEL WLSI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle