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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39583224, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METENQNERI YLQLYDYETK EFSGLTTYHG LVRIYNSNTW PSRIFWSVVV LSCLSLFMIH  60
   61 SGYLLLGYHS KPTLFQTNTI VPMTGLSFPE VTICNLNPLD LSKVREMNAS DSNLAYIMKY 120
  121 FNEITKSRNS ANLMENQKFQ QFIESYKESK GTAFDVNGFL QSVSKTCEET FVSCSFGREK 180
  181 LENCCQHVTT EMTETGICFR LSNKNNEYRQ WYSGNGFGWE LTLNGNNEDP EIYQNTQYDP 240
  241 ERGFLIMVHE SNKYPRINSY GVAVSPNSHL HAAIAMKNIS LLDKANWGSC SKGWTRNDTV 300
  301 GIQYTANHCE IDCKLRKVQT ECGCSPMAYS ARTMFQNFNF PICTPLEIST CFQQLRGNDN 360
  361 RWDDGCNCPS ECNLLEFDVT NSYSDLDSRS RGFTGFQVQN DISHVSLYFS RVAYERIEQQ 420
  421 KQLQTADLLS NIAGSMGLFL GMSTVTLLEI FIYLFKSVWG TVNSTRQQQF VDAVAEEEKE 480
  481 RAQSIVIIQN GGNDEDTKMP RFPASDRKMS GNSIHIHLDR RNSRMLRGGD LFSAPRGSVS 540
  541 IPSQLLSPLS KHSRKSISYG QLGRKVSTIG LPQPQTYDSV ESGTIPPKPL IRRCSTSTNP 600
  601 SMLTRKLSFA SQQSDPAQPV HLSRKVSTSS IFKSQLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle