YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4261977
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQLNPAPWF AILVFSWLVF LAIIPPKVMA HTFPNEPTLQ SAEKPKTEPW TWPMTVSLFD  60
   61 QFMSPTLLGI PLIALAITLP WIMYPAPTTR WLNSRFLALQ GWFINRFTQQ LLLPLSLGGH 120
  121 KWAALLTSLM IFLIT

Type	Start	End	Confidence
Cytoplasmic	1	6	0.84
Transmembrane Helix	7	29	0.83
Non-Cytoplasmic	30	61	0.87
Transmembrane Helix	62	84	0.89
Cytoplasmic	85	110	0.68
Transmembrane Helix	111	133	0.64
Non-Cytoplasmic	134	135	0.64