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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187026887, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAIVLLIGL IAYLALAEDY YELLGVDRDA DDRTIRKAFK KLAIKKHPDR NTDNPGAHDE  60
   61 FVKINKAYEV LKDENLRKKY DQFGEKGLED GFQGGNNYQS WQFYNDNFGI YDEDQEIVTL 120
  121 NRADFQRMVS DSNEIWFINF YSTYCSHCHQ LAPTWRKFAR EIEGTIRVGA VNCAEDPQLC 180
  181 QSQRVNAYPS LVFYPTGEFY QGHRDVELMV DFVIQRLKSE VLHLNSENWK ALSEDWEPYN 240
  241 RLPWIVDMCG GDNIECLSST TRRKLSSMLD GLANVATIDC HSEEELCSKF DHSSGVMWFP 300
  301 ARKLEKKSQI NIESMDAQEI TKHVIEYLEE LPWIEADSLQ RFLEGNDPDE AIAVWMLANE 360
  361 VQATQKKDFR RLPALIDNQI FSFDCSKSEI CDDLVDKTKL PQFIVFKPTG GYEIDYAGAK 420
  421 DFHSASIFIR EASKSHIHVL NRDSYEYAIS GGEFYIIDYF APWCPPCLKL LGEYRRFHTA 480
  481 TSEDSILHTV AIGSLDCVKF KDLCQTAGVG SYPTSIVYTP DGKQHKLVGF HNLDYILEFL 540
  541 DNAMNPSVLE MSPEQFEELV INRKDEETWL VDFFAPWCGP CQQLAPELQK AARVIKNYDE 600
  601 NAFVASVDCQ KYAQFCKETQ INSYPTVRMF PAKKTKQPRR AAFYDYPNHM WRNADSIHRW 660
  661 VYNFLPTEVV TLGNDFSSTV LDSSEPWIVD FFAPWCGHCI QFAPIYDQIA KELAGKVNFA 720
  721 KVDCDQWPGV CQGAQVRAYP TIRLYTGKTG WSRQDSQGYG IGTQHKEQFI QIVKQHLKLH 780
  781 D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle