YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39589105, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRLTIVPLL AVLCYAQDAS EACTKALTDC ENDLECQNRL APLMAACSTG TCQPQCRSAV  60
   61 LNVYQNKLGR VLLRSDATCI PGRDELRTCN FLPAESTVHC SLGKLACEGD LQCNSKFGVF 120
  121 MSECEADAAR GVCSEKCKTL LNQTIETSVG AIFSNCTCTA RDDQLCTNLK DNLLGVCLKN 180
  181 TPGVTLSPSD NSITDAPGND LADSSSSSFK ILTAVCVYIF TVLYL

Type	Start	End	Confidence
Signal Peptide	1	16	0.99
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	225	0.99