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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39589646, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTINYNLAVS TSKPWTLFKL LLKWRGSIWK AVILELAVWL VLYGILSVIY RTALNPMQQR  60
   61 TFERIVQYCD SRLSYIPLNF MLGFFVTAVV NRWTYLYQII GFIDNIGLMA AEYVRGRTEQ 120
  121 ARMYRRNIVR YCELAQVLVF RDISMRTRRR FPTLDTVVAA GFMMPHEKER YDEIQYKYSK 180
  181 YWVPFQWAFS LTYEARKKGL IESDYYQVVV QDEIKKFRTG LAWICNYDWV PIPIMYPQLV 240
  241 CLAVHTYFLV CLLARQYIVS EHADNKTEID LYFPIMSTLQ FIFYMGWMKV AEAMLNPFGE 300
  301 DDDDFECNAL IDRNITMVLM MVDQGYDRAP DLKRDDFWDE EVEPLYSEET AKIPNNPLKG 360
  361 SVSEVKLPEY VHEIKMVPHC DDTSPLVPGD EMRRRRVSVV PVKPSDQQHH HHGHRTRTSL 420
  421 GNIEMFRSFK NKIERSFSKP HLHDDLGRKT FSHGMLENME FDQSQGKSDG GSPANNNSFT 480
  481 NSAFVNSGED ISAKRIDTSS SQPQLSSGKR GSEHQFQHHV LDDVIEDDES DENQLTLRKK 540
  541 TSVFEPAITL VERFNETTGQ LEVKKIEEEK EEEKKKEEEN PLETISLLFT KTCSSRPSRT 600
  601 TRPFFIGVVR SESEDQGHPH LSPPTTKFE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle