YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187033921, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRFEGKVAI VTGSSSGIGR ATALLFAQEG AKVTITGRNT ERLEETRQHI LKSGIPEDHV  60
   61 LSVVADLVKD EDQDKLINET IYTFGHFDIL VNNAGTAFVD SHGRVGLDQD VSDYDKVMQI 120
  121 NLRSVVTLTQ KAKEHLIKTR GEIVNVSSVA GGHQAMPDML YYAMSKSALD QFTRSTSIAL 180
  181 IAHGVRVNSV SPGAVITGID EAMGMPAGSF EKMAKFWESK KECLPNGRVG QPDDIANIIA 240
  241 FLADRKLSSY IIGQTIVADG GSSLVMGMQA HDMMEILKQQ

Type	Start	End	Confidence
Signal Peptide	1	23	0.54
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	280	0.96