YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157763564
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVFRVLNTV PYTNRTGAKD LVASVHSFLT SNLLVGLAVL ISWKQFGGTP IECMVPLDFT  60
   61 SAWVQYSNNY CWAQPTYFIP FTSELVEQVI DPADVVADGI TVGGRGPVPR FVKKGGEKIS 120
  121 YYQWMSFFLL FEAACFRLPC FIWKYFASQS GMQVGEILRV ASDENNAVPM VKKANIDALC 180
  181 IHLRGVLRFQ KRLKLKKIVP HKILRFLNIK YSAYYVTFIY FVAKVAFLLN VILQSNLLNK 240
  241 YMLPHDRQQN FGFDMWKSIF YGGNGNESWR ESGVFPRVTL CDFETRDMGN VQMHTVQCVL 300
  301 LLNLFTEKIF VFLWAWYILL GAFTVGNLFS WLFAVFNQTY NEHFILNHLE MCEAPFDKDD 360
  361 IKNREHVNRF ISLYLGTDGL FLLQLIAQHA DVVFTTELTA ALFKSYIEIE AQRATLKQMN 420
  421 AVLPLLRPKD AEMESAMSTA PSTSHNQRRR GTEQMDKPPK GRQGSISTQL RPFNSFEEPD 480
  481 APTKKFDDSS SDEEKSSKKS SKKPSPTKKK ESPGTSGSPL RPSLARTGSP AFNQLHLDDH 540
  541 KLPKTSEKKH W

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle