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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157763306
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTRLLVLLF GCTAVNSQQL LSNPRCNHWP DRGTCELEFQ VKWYYDRYDH RCRRFFYGGC  60
   61 EGNENRFNSL EECSSQCHYE EPSNRDRCFQ PHDPGHCHSD IERWFFDQDK KQCVCSWWSG 120
  121 CGGNSNIYYS YNHCMLICGE YAEHGPGIDE KYWGRQMNHT MSAESAQIFN NPTGSFGQYS 180
  181 EEPYPVQVPV DNSYYNNHQR HSDGWNNQQQ LLTINISHSD DGPRYFHAAP AVTVPFLSRA 240
  241 QVFKTQADGL TIHRYDSEQR PMQVIDQNSN WQIQEQAPVQ DSGYMKRRFK IAKKKIPPRM 300
  301 IHLGTRPSSP SNSYRIQLDG DSSDSNRPVS YQVVREQDAH VQQHNQISQS LQDEAEETQK 360
  361 RIQETLRRNY YEQARYRRPP VQRLPPPPPP HQNTHPDNQN YHPELVNQFK SHLDEHEKAL 420
  421 RRKLEAQFPD HIITLIPHIE TVRHPDGRNV VRQRIQWTAQ PKGARISEHA PIPPVAQLPP 480
  481 IQPIQPIEVQ PTYSAPTFAP QEPEETEEPT MSPHEIARLK HEEMQRKFKE EMEKRQAEQK 540
  541 RQQEEQKRQQ EEHKMKIQEL KATQQKERER IMAERERAEA ERRIQYENEM RQRAEEYKAK 600
  601 MRMTTTPTPT TTIETTTEYI QFAYPTVPVR QVVYDADVRR PIPTSKSMAE PIDHVRPIIE 660
  661 NVTPASLSLE DIIAMDNQKS DYEDEYDVPM DFPDTEAPPL TTRAPPVTPR YVPPPPPQVS 720
  721 QPKAPVNGGM GMSPIVLPPN SGKKSKLFAP PSSEEYTQEV DFDPYMNLLL ILSLVSIALA 780
  781 GSSNSVNTWG GVIQYDEDWG YVDIRANAHT FWWLYAAKPA NSQRPLFVWL QGGPGSSSSG 840
  841 FGNFEETGPK TLNGTDNKAT WLQVADMVYV DNPVGAGFSY VDDKSAYTTD ITQIGKDLLT 900
  901 WLRRFLALHS EYRTRPFYIF CESYGGKMSA QFGKVITDAV KAGSLQLNFR AVALGDSWIS 960
  961 AMDYVNTWGP YLYANSFLDD HQLNLVNAEA AKCQALVDQQ KWSKATNCWG NMENLIGVET1020
 1021 NGVSWYNILK KGDTDDWSSS AAMRSNRVIT STRRLYNRFV APQNDDTLSS YMDTVVRQKL1080
 1081 GIIPDKVKFG AQAGDVFSFQ EGDFMTPIWE TVDQLLKDGH NVVVYNGNED LICNTMGTAA1140
 1141 WVNRLTWDGA KTFNSTTRHS FKTDSFPLAG YYKTYKNLQF WWILRAGHMV AYDTPESAIF1200
 1201 MLKAVVKQYN A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle