YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39593795, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLVSLLVL AGVAAAARNG IDFIQPVSVA TFQCIKKDGY SFVIPRVFTS VGTLDHTGIQ  60
   61 NVKNARAAGI TDADGYIFPC LATHCPSAAN QVKQTLDALK GAGTHVSTLW LDIERLAWPA 120
  121 NHGSNRAFIE AMVKEAEALK QQVGIYSNYY NWQDIVGLDY HGLSHLMLWW AEYDGEKDFG 180
  181 KFRAFGGWTR PTIHQWHGTE TGPCGVSVDL NYVP

Type	Start	End	Confidence
Signal Peptide	1	16	0.99
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	214	0.99