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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39596394, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNRKNLVHR ILTPRLLRRN EEKYRETEAL VKKFKKEQTD VRKPFADDSP EKEEGTGEQI  60
   61 QHTVRDFCEQ TTFHGVNMIF TTTLFWVRVL WVIISFICIG LCLYSFSHIK AKYDRQEKIV 120
  121 NVELMFESAP FPAITVCNLN PFKNHLARSV PEISETLDAF HQAVVYSNDA TMDELTGRGK 180
  181 RSLNDGPSFK YLQYEPVYSD CSCVPGKQEC IAQTSIPRSL ENACICNYDR QDGSAWPCYS 240
  241 AQTWEKSICP ECNDIGFCNV PNTTGNGNIP CYCQLAMGYC VFLPESRVRR VWEFQGNKIP 300
  301 EKGSPLRKEY LEQLTQLGYG NMTDQVAITT QAKEKMILKM SGLHPQRRAA LGYGKSEFIK 360
  361 MCSFNGQQCN IDTEFKLYID SSFGNCYTFN ADPNKNLTSS RAGPSYGLRL MLFVNTSDYL 420
  421 PTTEATGVRL AIHGKQECPF PDTFGYSAPT GAISSFGISL RKLNRLPDKN CYNEDSPPRD 480
  481 NIYKEYKYEP EGCFRSCYQR RMIGKCGCAD PRFPNPWGRS PWCDSRNSTV LNCLTTEGAK 540
  541 LSLKNRCRCI HPCKQDQYTT TYSAAKWPSA STQSHCEDQS KDCNRYLHQH AAMIEIYYEQ 600
  601 MSYEILSESE SYSWFNLMAD MGGQAGLFLG ASIMSVIEFL FFAVRTFGIA CNSKRWKQKN 660
  661 ERLRAEELND AEKGSSTNNN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle