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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157772146
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWLGTILCL YLGSSWVQSN LEFGLTNAFL PQTTFLLGPM EVPCNESLCT GPLSEIYCHG  60
   61 EILQNSWQFG LQKTCPGDKL RVPAKEVLAN FKKLPYPMSV DKFRSFCEES FEQVNYLEVV 120
  121 NLTDWKIDPV FLREITDEKQ RNLASELNER WKRLARQFTS DVLTHPDMYP LLPVQNPFIV 180
  181 PGGRFDVYFY WDTYWIIKGL LVSKMYETTK GIIDNFSNLV TTLGYIPNSG NIQLTRRSQP 240
  241 PLFPHMVWEY TKATGSYDEK WLNSMIMEME FWEKNRTIEV DGHTLFAYKT LSNCPRPENF 300
  301 RGDYSIGMNT TMPSDVWRGI SSACESGWDF SSRWMQGDTT AALSNIHTDQ IVPVDLNVLM 360
  361 ANNYRYMALY AEHFLKIDEA TSYRRKLEKI SAAIQHVLWD DKLGAWLDFD VSLKKKNSNF 420
  421 YPSNVYPLMI PGFEKYADKV ENYMKKSGAL KFAGGIPSSL PSESLNQQWD FPNVWAPNQH 480
  481 FVIQSFLATS NSFLQQEAAK QSQAFIETVY NGMYNPTGGL TGGVWEKYDA RSTGGAPGTG 540
  541 GEYIVQEGFG WTNGAVLDLI WTFRSNHNRL EKSSELELET SQQFALVYTA AGFCAMVAVV 600
  601 VVFKGLIKYK TRQASEDAEA GALLLGENDE NDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle