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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187033272, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFTAIILLL VHGTLACFPT SQRSYQYGAP TQQFASCTPQ CCGCSQAQQV PAQPVAAAAA  60
   61 RVAAAGKTPT QPISVQGSSA EGLLGQKVSL TEFTADGYNA EGGGPVRSGN ALTCNFDGRP 120
  121 CCWANVPPPD DQLDWQIANG VPIQLQNRGV PTPEGSYLIA YAKAAAPSDE AQFASCSIGC 180
  181 ASSDIVVRAK HWQSESVLLQ VCLRESFPTN AERNPLINCQ EFPYVDGMGT TEVILPKTSL 240
  241 VDIVFVASNF IGDQGDVAIL DDIEVSYDRN GAECQNEFEE GAEEEDKQDS ENAIKAEEIE 300
  301 AAAKNKRREL FEKTQPEGKI VSATERFGSK GFRGGEKAFR GGAGAGAGAG AGSAAGSKFG 360
  361 GSFEGGENGN AAVGTSHTEE TVFASVKTAK LPSGHVVAKG AKTAEFSEAV CNATKCDFEG 420
  421 ENTCGYKDAH TTQSIRGLTT KFNVVTGQFM NRVTGIKEST EGEFYAATFL FPREMAGLEA 480
  481 TVEPFTEQSR IRFHYYEGTH GVQLKGCCGT IESCPFSSDK FVTVADRAWK TASFKCPKGT 540
  541 DKVIFICENT RTNQGACAVD GIGLVENDTP LKTAKPLC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle