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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187037136, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFVLLIFFL FTTKCSSLKI KSEIDVTKYG LTQQEILKSP HYKDKVFNIP MNTESGEELL  60
   61 EHWAVQGFSG VVAAIATRRL SLVEEYQKKD HEKCSSEAET LAEHAKCLIQ LEDYAHRNRL 120
  121 IHRKRLFVRK MRRRIDKMET RTTMAPITAE EIKKEKEWVG SFRFRAKREI KVHTRDSYTL 180
  181 KSHKEMSPFG LVTKHLTSAV KLLKHTDKVS KWQDTIERIA KKADVIKEQK KMEDFMQRRL 240
  241 SVFTDAAAKM KQNKKLAKDD SLKEMNDLEE FIDNDQIRDV LRNRKEKITE QDKLLMIPMK 300
  301 MMRDAAKMSL GMTGYNTTDF DRKIVRIISP RIMSVIPQEE EAKNNEIDVL SPSLFALHDD 360
  361 GSGVEKKASL GNLLGSLTNN KDSQDFLDFI VEATGVNEAM ERVEKKIGEY RRLKDDAMGR 420
  421 GPEGQPLYFT KENVTEKYPH EAKKIDMFEA LDKTYSDEQL KEMNRTGYTI MRHDQMDLIY 480
  481 GKGSVGENEK FLKTAKALSR PQIDRAIMST IKDLAHEKVK FEARRNDIVL SPITFSNFIL 540
  541 DPVSVSQPTI LSPVMLCSLI LSPAIYGVMI MSPWLMVPVI ISPRLLSPVA VNPFLMVPII 600
  601 ISPLAFNPFI LCPGSMNPFV LSPLVFTPFI LSPQVLTPLI LTPFCLGPII LNPLALSPLV 660
  661 LSPFVLSPTI LSPQYVTAVV LSPYALSPAW GSDGAMVTVF ASPSWLS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle