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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157769367
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVVFQTFPL FLFLLLLQLT RPLPLIPSLI NPKNPHANSQ AYVETSNVTS QFTIFASNIS  60
   61 SCRFKTAVIP CECFLQVSND YRLEENGRML SSFAVSAPDI KIFTPSTHEM LNELTVHIIP 120
  121 KLCREDVSDI QLEYRSFQVF PGEEESSWKT VSAVAKTLKD TKTSLIFGCK HFSDPGYYRV 180
  181 SIRLSLVNYT VQADKWIVVN QTTQNALRLR EDSIFPHCSS DYKIGWDLSE CSMDHLHYRL 240
  241 RILAVPEGAK NHDDGAVYIE EIAIAPEMNS LKISCSQFDI IHEKYCFELV SVNRNTSVSH 300
  301 TWHSVCVSTE PVERKVGGWS AWSEWSACSE TCGLGRQRRV RFCNEPVPKR SKYCDGPLIE 360
  361 TQECMMTKCP EAMMPQSLST NCSCGCPLSI EASSFFASSR HSRMCEGNQT WTLPKLDGIK 420
  421 IADFTIKKQG EAKGKLFFFL RAPYQELVWS SDSHQEYEFS LPMSTPIFVV LWSKSNDTSR 480
  481 ITQIDDGFTV SYSIRDADSS PTVAKINSCQ PFCPETMAIA IMAIIFIAII FIPPLVCAAV 540
  541 TASLRRNSSP EVPLMDNKYD SEMIRSGNTE STHVSSRNYV AKRSIGIQLS VQSTPRTGRA 600
  601 CLSYESPVPP RGQSSLSECD ELEYDYYDGT TFPGSFLAPV QDVMYSQIDI DQIIGHSELF 660
  661 INNVEKADVH TQI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle