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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7494394
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTIYMWL VFLFFFLELA KCGIPGLHKW VINNFPSCVK IVDRNKLIDW NCIGKLEKAK  60
   61 GKHKRNHNGG DNNGDNNGDN NYDDNYDDNN YNDGCEINRN IKNKDNTYDN NINNTYNKYD 120
  121 IDDDKKKSFC KGKKYKEEKI FEVDNLLFDL NQLLHKANVK FINYDNYFLK LTRLIKNVLK 180
  181 KFEPKKNVVF AIDGICPFSK LKLQIKRRAK SKLKNKENHL VNDITCGSIF INKISKFLVN 240
  241 FLKHLLSFEK YEHVKFFIST DQEVGEGELK LMNWISNYVK NIKNIKNIKI NKNIQIKEDE 300
  301 KINNMIEIKK ENIMNHLHYK QEMFNDIKND NLKYEEKKKI RTNNKMNNST NYDITNVEEE 360
  361 SFVIVGADAD LLLQCLSLKN VHNIFIYTYQ IFNVEINDNN MKKENYLMKN KVIKGDPIFK 420
  421 EDKNNVCKMN GAYKKYEDDI DSDNIQKDIT RWSNHNDNIN YNNDNINYNN DNINYNNDNI 480
  481 NYNNDNINHN NDNINYNNDN INHNNDNINY NNDNINYNND NINYNNICPT GDKNHIEKIL 540
  541 LKTQSTNVQN VKKKKIKVLY NLKTFINLFL NKYPKWFHKI KADLLILFIL KGNDYLPKIR 600
  601 EGNFGIFFEA YFKMLENIKN RNNCEEKKKT DDFEINKYDD LGEREYSYNN TYEGLLDGNN 660
  661 YKINKKEFLL FLNEVQKLVH FTNIYNNNNI RHYHNSNDIR FFKNDKKMYM KQTNSCSPLL 720
  721 LINELISKKI LDKDTFTINV TKNENDMFQC NLIYFKNHKR YVYSSKSKKK KNAMHITSYD 780
  781 FLNEHFPHLM KYIDKEYFEK NMKQSDNNVE ILNNNELNTN QIQHIQKGDN NKCDDVPILK 840
  841 NNVKCYNEYY NNIGGNDKVK NSIHMENYIK NFYLQHCQDE KIYKEEMDIV ENYIEGIHWL 900
  901 VEMYNKTYCI NFNFFYKYMS SPSLLSLYYY LLINRDDIYN NMKSMDYCNN YKNNYMEIIQ 960
  961 KINLNIFRSN LEYYDFINFC VDKYNSLKRN ITKIGTCRNK DTSYNDEEKI IHTDDKRYDK1020
 1021 RFIYFKNIYN ILFSNNIIII RDSIQKLNDV LKSQVYNKRM INYYWNVYTK KPLKKFYKII1080
 1081 FFKAGKMFVS KFSLFNLHIE QLKKKENNQN YSHDTNEELC HQKGQRNEED NTYNKMAIRN1140
 1141 NFLHSIFNNN KCIKTNRKFT TNSLRSVDGK TKVLKGVFKR KSVRWQYH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle