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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9581854
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANSKRKLPT KPSATEDATP HKDTPRSSEE FPTDVNHKSA KKSFLPQNAF FRDCLGHDLS  60
   61 NFTSLTNFTS WLNRPVDGAA LGIFRLLYGA AMLIDIAEER GGGQLDVRFQ EPLHCHFPLF 120
  121 NGMRALDYPL MGCVYLCMWL GAWGIMLGYR FRTSCLAFLI PYWYIFLLDK PTWNNHSYLF 180
  181 GLVGTLLLFT QAESYCSLDR WLNPRKSHCI PYWNYFLIKF QFFILYMYAG LKKFSLEWLS 240
  241 GYAMSNLSYH WVFAPFRQVI DPELIDLLIV HWFTAFFDVS IAFFMTLEKT RLLVTPFMLS 300
  301 FHLMNSRLFV IGMFPWVCLA EVPLFFSFDW PRRLGNWSKI RDVHPKDPEE ELSKPGILAR 360
  361 LRTGLILAFC GLQLFLPYSH FITKGYNNWT NGLYGYSWDM MVHSYDTLQT SIQVVDNESR 420
  421 QVHDLNPYAF TEYDRWTKYA DMAVQYARCI EENLQEPDIG RNISIYFDIW CSMNGRFQQR 480
  481 SFDPREDLLR AKWSPFESTS WSLPLLNELN HMRPKLRTIE TEVLAWNNYS DVIFVADFPG 540
  541 LTLTNFISPD LINCTLTILE GNVRYRNERD PEAYFLTAGK SIGLESNITH LVTTIGQKPA 600
  601 SYLFTYTNKT MLEQGITIEQ TDTEERSVLP LWQEFQHRVT NYQQFLGHIG NCLMYLLYDV 660
  661 PIPQAVKGGD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle