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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCMC1_RABIT
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRWLRGFVL PTAACQGAEP PTRYETLFQA LDRNGDGVVD IRELQEGLKS LGIPLGQDAE  60
   61 EKIFTTGDVN KDGKLDFEEF MKYLKDHEKK MKLAFKSLDK NNDGKIEASE IVQSLQTLGL 120
  121 TISEQQAELI LQSIDADGTM TVDWNEWRDY FLFNPVADIE EIIRFWKHST GIDIGDSLTI 180
  181 PDEFTEEERK SGQWWRQLLA GGIAGAVSRT STAPLDRLKV MMQVHGSKSM NIFGGFRQMI 240
  241 KEGGVRSLWR GNGTNVIKIA PETAVKFWVY EQYKKLLTEE GQKIGTFERF ISGSMAGATA 300
  301 QTFIYPMEVM KTRLAVGKTG QYSGIYDCAK KILKYEGFGA FYKGYVPNLL GIIPYAGIDL 360
  361 AVYELLKSHW LDNFAKDSVN PGVLVLLGCG ALSSTCGQLA SYPLALVRTR MQAQAMLEGA 420
  421 PQLNMVGLFR RIISKEGLPG LYRGITPNFM KVLPAVGISY VVYENMKQTL GVTQK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle