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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23126059, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDRRRWGIA HRTSRIILIA LSAFLVTIAP TFPQNFSGVF FAPQVLAQTS NQQQTEAVTG  60
   61 SFIDYFAEER QFKGHEGSVN SASFSPDGKL IVTAGADNTA RVWDFAGKQV AELIGHQGNV 120
  121 KSANFSPDGK LIVTASFDDT ARIWDISGKQ LVELKGHQGN VYSANFSPDG KAITTAGADK 180
  181 TVRLWDLSGK QLREFKAHNA SVYSAKFSPD GKHIVTASAD KTARVWDTSG KLLAELKGHT 240
  241 NTVWSANFSC DDKRIVTASD DKTARIWDLS GKQLAVLQGH QDSVYSANFS PDSKQIVTAS 300
  301 IDFATLLWES SGTLLGKLQQ HTGGVNSANF SPDGKWIVTA SSDSTARVWD LSGKMLTELT 360
  361 SFQREVGSAR FSSDGQHIVT KSGNIAQVWD LSNRQLVEFK GHQADIRSVR FSQNGELLVT 420
  421 ASDDKTARIW DLSGKQLAEL KGHEDFIYDA RFSPNGKSII TASNDKTSRI WDLSGKQLAE 480
  481 LKHQDYVSSA TFSPDGQKIL IESGSFTLSI WDIYGKFLAT IKGDKFDINS GTFSPDGQRI 540
  541 LTTSLDDTAR VFDIYGKLLT EFRGHQEQVI NANYSPNGQR IVTASLDGTI RVWDTSGKQL 600
  601 TLLKGHKGSV NSASFSPDGK VIVSAYDDKT ILVWDTSGKI LAQIGTPKNE SEAGFQGKKF 660
  661 SPNDSEIIKL DSFSPDGKRI VIDNRVWSLS NKLLVQIPKL KFPEIPTDES SLRLIFSVTK 720
  721 VNSTNFSHDG QMIITSSKGI VYLWNSSGKL LAELKKHWGP IRSASFSSNG QQIVTASYDG 780
  781 TARIWDTSGK ELALLNHNSF VNSASFSPNG KQIVTASDDN TARVWNSSGK LLTELKGHTQ 840
  841 PVLSTSFSLD AKHIVTASAD KTARVWDLSG KQLAELQHSA IVSSANFSSD GKQIITTSHD 900
  901 GSAGVWDLNN KTAVRLSHQH IVNEARFSPD EKLVITASRD GTARVWDLSG KQIVLFKHQS 960
  961 SVNSANFSPD GKQIITASDD KTARVWNLSG KLLLELKKSE TTLNSASFSP DGKRIVTTSD1020
 1021 DGTARLWNTS GKLLMVLKGR PDWLLDASFS PDGKQIVTAS DDGTARLWNT SGKILAELKG1080
 1081 QEKTVKSASF SPDGQKIVTV SFDAASSSGA VRLWDLSGKL LVELQGHQGQ VLCANFSANG1140
 1141 QRIVTASDDK TARVWDLSGK QIAILSHQGG VNRAIFSPDG QRIVTASDDG TAHLWDLSGK1200
 1201 LLTQFKEHQD AIQSVSFSPN GQLVVTASWD GTARVWNLSG KQIVLFNHQR EVIDTSFSPN1260
 1261 GQYIVTASID NTARLWDLSG TLLVEFVGYQ GGIGSANFSP DGQWIINLEY DKPSLWNLSL1320
 1321 RFPLRFPKAS IYAYEDTFPN TSVEKSTALL KEYWVNIGSA KFSPDGQRII SVFSDGSTRV1380
 1381 WDLSGRLLAF IKGHQGRVTS SNFSPDGQRI LTTSNDGTAR IWDLSGKQLA SLELPALPSS1440
 1441 PKVEADRLQN LEFYAPNCAA AFEPWQKALK IYSEIADHEN QAYMLRELGN AYYCLGNFTK1500
 1501 AIASYSQSLE NASKYNYLQI ELNSLSNLGR VYNSLGDYDI AIKYYNEALK ILDMHDAPQN1560
 1561 KTDVLRGRGY AYYQNNKLEE ASKDYLQALD IDEKNKNVAG IAINKVNLAN IYFYLGDFFQ1620
 1621 AIQYYREALE FSPSEALAGL GNIYLAFGDT AKAVDLHQQS LAKAQQDENY EIQGNALNNL1680
 1681 AYTFQLSGNL PAAEKTLFNA IRVWESLRSR LDDANKISIF EKQTRTYRLL QEVLIAQNKL1740
 1741 TEALEISERG RARAFIDLLN KRLSPNQTEQ SKLPTVNIEQ IKQIAKNENA TLVQYSIITD1800
 1801 EFKVDGKLQT QDSELYIWVI KPTGEVSFNR SDLKNLWQKE KTTLKQLVDK TRFSMGVKDI1860
 1861 KSRSPGGIKV SAAEGAKQGD RLQRLHDFLI KPIADILPSN PNDRVIFIPQ GELFLVPFPA1920
 1921 LQYDQNKYLI EKHTILTAPS IQVLDFTSKQ QRRVEKLNAK SLIVGNPTMP KVELEPGKPP1980
 1981 EQLKDLPWAE KEAKDIAEIL KTQALTGNQA TKTAILQKMP EAGIIHFATH GLIDDNRGLG2040
 2041 SAIALAPDPP SSPLTKGGKE GGNGLLTAEE ILNLKLNADL VVLSACDTGR GRITGDGVIG2100
 2101 LSRSLISAGV PSVIVSLWAV DDNSTSFLMT EFYNNLQQKL DKATALRKAM LTTMQKYPQP2160
 2161 KNWAAFTLIG ES

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