YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7438248, gi\|2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKINQLFFPF LILAISFNSL LSSAAESPPE VVDIDGKILR TGVDYYILPV VRGRGGGLTM  60
   61 DSIGDKMCPL DAVVQEHNEI DQGLPLTFTP VDPKKGVIRE STDLNIIFSA NSICVQTTQW 120
  121 KLDDFDETTG QYFITLGGDQ GNPGVETISN WFKIEKYDRD YKLLYCPTVC DFCKVICRDI 180
  181 GIFIQDGVRR LALSDVPFKV MFKKA

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	205	0.99