YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|186463273, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRLQTNGTQ KDMEQGYSDK AYRWNREKYS SRRRFVDIWS FVLTLLFKLW LYNKSWSYPG  60
   61 GVTEVKQTAR RKTQAVWIRN TLLDLGPTFI KVGQLFSTRA DIFPGEYVEE LAKLQDKVPA 120
  121 FSYEQVEATI EKELGKKIPE LFDNFEPIPL AAASLGQVHK AVLHSGESVV VKVQRPGLKK 180
  181 LFEIDLQILK GITRYFQNHP KWGRGRDWLG IYEECCRILW EEIDYLNEGR NADTFRRNFR 240
  241 GYDWVNVPRV YWRYASSRVL TLEYLPGIKI SQYEALEAAG LDRKAIARQG AQAYLLQLLN 300
  301 SGFFHADPHP GNIAISASGA LIFYDFGMMG RIKSNVREGL MQTLFGIAQK DGDRVVQSLI 360
  361 DLGAIAPTDD MGPVRRSVQY MLDHFMDKPF ENQSVAAISD DLYEIAYNQP FRFPATFTFV 420
  421 MRAFSTLEGV GKGLDPEFNF MEVAKPYAMQ LMTDMNGSEG NTFINELSRQ AAQVSSTAFG 480
  481 LPRRLEDTLE KLERGDMRLR VRSIETERLL RRQSSIQLSM SYALLITGFT LSATILVVSN 540
  541 YVLWALVPGL IALGISVILI RLLLRLDRYD RMY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle