YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3789781
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIRKYFLII ALLLMPWLAI PSVSAADKGG FNTFTDNVAE TWRQPEHYDL YVPAITWHAR  60
   61 FAYDKEKTDR YNERPWGVGF GQSRWDDKGN WHGLYMMAFK DSFNKWEPIG GYGWEKTWRP 120
  121 LEDDNFRLGL GFTAGVTARD NWNYIPIPVL LPLASIGYGP ATFQMTYIPG SYNNGNVYFA 180
  181 WMRFQF

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	186	0.99