YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78357857, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNKHGDFCA AARMRKEKPM SEPRKHPFVE FLEAISVAVV LALVIRTFIV QAYTIPSGSM  60
   61 LETLQIGDYL LVNKFSYGVK IPFTHDYLLE RSGPEHGDII VFEFPDNPDV DYIKRVIGVP 120
  121 GDVIEVRDKE VYRNGQRLEE PYAVHGDPGY QMRRDNFGPV TVPGGSYFCL GDNRDFSQDS 180
  181 RFWQNTFVRK EAIRGKALFI YWSMDGFTDI RWGRIGSFVH

Type	Start	End	Confidence
Cytoplasmic	1	27	0.72
Transmembrane Helix	28	50	0.70
Non-Cytoplasmic	51	220	0.88