YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84317886
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYPPLRLAAG AGGSLCLRDT DPGQARPVRI LRSQGVSLMH KKVAVILSGC GVYDGAEIHE  60
   61 SVITLLRLSQ RGAEAQCFAP NIAQHHVVNH LTGEEMPESR NVLVESARIA RGEVKDLREA 120
  121 RAEDYDALIV PGGFGAAKNL SDFAINGAQC QVQPDVLALA KAFAEAGKPV GLICIAPAMA 180
  181 AKIYGAGVQC TIGNDADTAD ALKQMGAEHI DAPVDEIVED SARKLVTTPA YMLAQSIAEA 240
  241 ASGINKLVDR VLELVDQDKA

Type	Start	End	Confidence
Signal Peptide	1	25	0.58
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	260	0.99