YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|126096576, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METEFNLVSL FMQASIVVKI VILILISFSI LSWAVIIQRS RVLTEAKKNA LAFENKFWSG  60
   61 EDLHRLHEGL ENRRDGLNGS EQIFYAGFKE YMRLQQVNPD APEATMKGSS RAMNLALNRE 120
  121 VENLESYIPF LGTVGSISPY IGLFGTVWGI MHSFMGLSAV KQATLQSVAP GIAEALIATA 180
  181 IGLFAAIPAV MAYNRLSLRV NKLEQDYANF IDEFTTILHR QAFSKK

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.91
Transmembrane Helix	15	37	0.92
Cytoplasmic	38	126	0.97
Transmembrane Helix	127	150	0.84
Non-Cytoplasmic	151	171	0.80
Transmembrane Helix	172	193	0.91
Cytoplasmic	194	226	0.95