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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71908921, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPPAFLSGI RGKLIAIFVL IKVVPLVLLA WFAWYAISQL GEEVSVKAGG MADAMLTTTK  60
   61 SIGKTVTDDS IRALDLRSRE AIEALTTDTA KEIASFLYDR DNDIRQAADL EPSEAAFRRF 120
  121 LNERRRLIYQ HGPWKLAEDG KSWVPEKPVV REAKVTRPVL PDNAKDFHAR PPEYFGEAEQ 180
  181 RPLFVEMTYV DLDGNEKIKV TSGTLTEKGL RNIGDRGNTF SKAESYFADL KKLKPGQIYV 240
  241 SDVIGAYVPT QAIGPYLPAA LEKAGKPFKP EESAYAGTEN PVGKRFRGIV RWAMPVTKGG 300
  301 QTVGYITLAL DHDHIREFSD RLMPTEDRYT PIADAIKGNY AFIWDYKSRS ISHPRDYMIV 360
  361 GYDPLTGRPA TPWMDEDLYA EWQASGKPSD EFLAGIPPFR DQNLKRKPAK ALVKAGTVGL 420
  421 DCRYLNFSPQ CDGWNAVTEH GGSGSFVIFF SGLWKLTTAA AIPYYTGQYG NTPQGFGFVT 480
  481 IGANVDEFHK AATDTAAQIN TLLEKKDTDF KTRRRELLEQ VAQSLTSTAI GLWTSTLLMI 540
  541 GLVIAIAVWM AGLLTRRITG MISGIHAFQE GDLKRRLDAR SSDEMGELAA SFNRMADSVQ 600
  601 DSFKRLDDAR EKAEEASRQK SAFLATMSHE LRTPLNGILG FAELLKYELD NPSHQEYATV 660
  661 IQQSGEHLLN LVNEILDLAK IEAGEMLFKR VPTPLAGLVS ECVAGHQVTA TAKGLGFDLN 720
  721 VAEGLPEQLV TDPLRLRQIL NNLLSNAVKF TEQGKISLTV RPAGQEIAFA VSDTGAGIPP 780
  781 ESLDMVFEKF KQLESFLTRE HGGTGLGLSL VRQLAEHMGG RVTLESAVGV GSTFTVYLPQ 840
  841 DTTDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle