YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|53733169
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPMPLFTKAP KSLCILRLSA VGDVCHALAV VQHIQAYYPQ TEVTWIVGKT EMGLLSGIPN  60
   61 VTLIPYDKKT GWKGVLSLWK QLKNKQFDAL LNMQTAFRAS ILSLGIKAKF KIGFGEKRSR 120
  121 EGQWLFVNRR IRDPFSPHVL DGFMAFAEYI GVPKAEPKWE LAISQDDYKF ADQFIDFSRK 180
  181 NLLISPCSSK AEKDWLIERY AEIANIAHQH NINVIFCSSP AKRELEIVEK ITALCHFTPT 240
  241 NIAGKTNLKQ LTALISKVDL VLSPDSGPAH IATTQGTPVI GLYAYHNPLR TAPYNNLDNV 300
  301 VSVYEENAQK EFGKPSSELP WATKLKGKNL MAEIQVEPVI EQMKKLGLF

Type	Start	End	Confidence
Signal Peptide	1	27	0.95
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	349	0.99