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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|145638188, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNKKFKLNF IALTVAYALT PYTEAALVRD DVDYQIFRDF AENKGKFSVG ATNVEVRDKN  60
   61 NHSLGNALPN GIPMIDFSVV DVNKRIGTLV DPQYIVSVKH AHQYMNDFYF GHYNGHRDVS 120
  121 DDENKYSVVT QNNVNPNENW HVDKRLDDYN MPRLNKFVTE VAPTTPTLAG DDLETYKDKE 180
  181 KYLSFVRVGA GRQLVYEKGS HHVEDKEHGE DLKDLSAAYR YAIGGTPYKG INIDPSQSKK 240
  241 GLIGFGDSRE DHVINSKTLL SQDPLTNYGV LGDSGSPLFA FDKQQNKWVF IGPYTYWAGY 300
  301 GKKSWQEWNI YKSQFTKDVL NKDSAGLLKG NTQYNWTSNG NTSMISNGSE LLEVNLFDNS 360
  361 KHTNREKANY GKSVTFQGNG TLTLKNSINQ GAGGLFFEGN YTVEGSSDNI VWNGAGISVA 420
  421 EGKTVTWKVH NPQSDRLAKI GKGTLIVEGK GENKGSLKVG DGTVILKQQA DANNKVKAFS 480
  481 QVGIVSGRST VVLNDDKQVD PNSIYFGFRG GRLDANGNNL TFEHIRNIDD GARIVNHNMT 540
  541 NASNITITGT GLITNPSQVT LDYIRPRDEE NPYALRRIKD GGQLYLNEEN YTYYALRKGA 600
  601 KANLQLPYND NESNETWLYM GKDKNEAQKK TMEYINNSRM NGFNGYFGEE DSKNNGNLNV 660
  661 TFKGKSEQNR FLLTGGTNLN GDLTVEKGTL FLSGRPTPHA RDIAGISSTK KDQHFAENNE 720
  721 VVVEDDWINR NFKATNINVT NNATLYSGRN VANITSNITA SNKAQVHIGY KAGDTVCVRS 780
  781 DYTGYVTCHN GTLSTKALNS FNPTNLRGNV NLSGNANFVL GKANLFGTIH STENSQVNLK 840
  841 ENSHWHLTGN SDVHQLDLAN GHIHLNNVSD ATKATKYHTL NISNLSGNGS FYYLTDLSKK 900
  901 QGDKVVVTQS ATGNFTLQVA DKTGEPTKNE LTLFDASNAT RNNLNVSLIG NTVDLGAWKY 960
  961 TLKETDGRYD LYNPEVEKRN QTVDTPSIAM PNNIQADAPS VPSNNEEIAR VDAPVPPPAP1020
 1021 PAPATGSVMA NGQPETRPAE TTQPAMEEAN TANSTETAPK SDTATQTENP NSESVPSETT1080
 1081 EKVAENSPQE NETVAKNEQK ATETTTQNGE VAEEAQSSAE TKAQTNKVAQ SGSETEETQT1140
 1141 AETKSEPTES ITVSENQPEK TVSQSTEDKV VVEKEEKAKV ETEETQKAPQ VTSKEPPKQA1200
 1201 EPAPEEVPTD TNAEEAQALQ QTQPTTVTAA ETTSPNSKPA EETQSSEGTN AKPVTPVVSE1260
 1261 NKVSQPTETE KTAKVESKEA QETPKVASQA SPKQEQSETV QPQAELESEK VPTVKNAEEV1320
 1321 QAQPQTQPSA IVSTEQPAKE TSSNVEQPEQ ESSTNTGSAT AMTETAEKSD KPQMETVTEN1380
 1381 DRQPEANTVA DNSVANNSES SESKSRRRRS VSQPKETSTE ETTVTSTDKT TVADNSKSSK1440
 1441 PNRRHRRSVS QPQETSTEKT TVADNSKRSK PKRRSRRDVS SAPHNVEPLH NLTSTNTNAV1500
 1501 ISDAMAKAQF VALNVGKAVS QHISQLEMNN EGQYNVWVSN TSMNENYSSS QYRRFSSKST1560
 1561 QTQLGWDQTI SNNVQLGGVF TYVRNSNNFD KASSKNTLAQ ANLYSKYYMD NHWYLAVDLG1620
 1621 YGNFQSNLQT NHNAKFARHT AQFGLTAGKA FNLGNFAVKP TVGVRYSYLS NANFALDQDH1680
 1681 IKVNPISVKT AFAQIDLSYT YRLGEFAITP ILSARYDANQ GSGKINVDRY DFAYNVENQQ1740
 1741 QYNAGLKLKY HNVKLSLIGG LTKAKQAEKQ KTAEVKLSFS F

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