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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67923858, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALSSNTKS SLVKKQGASA SRKLTKLETA EKYRWNRENY SIARRRIDIW RFVLSLLFRF  60
   61 WRNGKKWSYK GGFTQEKLDA RRKIQAVWIR ENLLNLGPTF IKVGQLFSTR ADLFPAEYVD 120
  121 ELSKLQDEVP AFTYEQVSKT IEKDLGKPLS KLFRNFDPVP IAAASLGQVH KAKLHSGEEV 180
  181 VVKIQRPGLQ QLFTIDLAIL KKIAYYFQNH PKWGKGRDWI GIYEECCKIL WEETDYLNEG 240
  241 QNADAFRRNF RGENWVKVPR VYWRYTSPRV LTLEYLPGIK ISHYEGLEAA GLDRKLLARL 300
  301 GAKAYLCQLL NDGFFHADPH PGNIAVDTDG SLIFYDFGMM GRINTNVREK LMDTLFGIAQ 360
  361 KDGDRVVSSL IALGALSATS DMGPVRRSVQ FMLDNFMDKP FEEQSIAAIS DDLYELAYDQ 420
  421 PFRFPATFTF VMRAFSTLEG VGKGLDPDFN FMEVAQPFAL ELVADLDGST GNSIIDELTR 480
  481 QATQVSNTAL SLPRRIDDTI EKLDRGDIRL RVRSVESDRL LRRLGMMQMA TNYSVFVSAL 540
  541 VICATLLFIN GYIRIAIAAV MLGLVPAWAL VRLLRRINRL DKMF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle