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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|53760027, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKRTDIKSI LIIGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPDM  60
   61 ADATYIEPVT WQMVEKIIAI ERPDALLPTM GGQTALNCAL DLAKHGVLEK YHVELIGASK 120
  121 EAIDKAEDRE KFKAAMTKIG LGSARSAVAH SMEEALQVQA SIGYPAIIRP SFTMGGSGGG 180
  181 IAYNREEFMT ICERGLEASP TSELLIEESL LGWKEYEMEV VRDSQDNCII ICSIENLDPM 240
  241 GVHTGDSITV APAQTLTDKE YQIMRNASLA VLREIGVDTG GSNVQFAINP DDGRMIVIEM 300
  301 NPRVSRSSAL ASKATGFPIA KVAAKLAVGF TLDELRNEIT GGATPASFEP SIDYVVTKIP 360
  361 RFAFEKFPQA DSRLTTQMKS VGEVMAIGRT FQESFQKALR GLEVGADGLD EKTTDLDEIQ 420
  421 KELGEPGPER IWFVGDAFRA GLSVDQVFDL SKIDRWFLVQ IEDIIKREQA LKGRHLADLD 480
  481 RDALFQLKRR GFSDKRLAKL LGTDQHAVRA YRQALNVRPV YKRVDTCAAE FATDTAYMYS 540
  541 TYEEECEANP TSKRKIMVLG GGPNRIGQGI EFDYCCVHAA FALREDGYET IMVNCNPETV 600
  601 STDYDTSDRL YFEPLTLEDV LEIVALEKPE GVIVQYGGQT PLKLARDLEK AGVPIIGTSP 660
  661 DAIDRAEDRE RFQQMLQELD LKQPPNRTAR TPEEAIRLAQ EIGYPLVVRP SYVLGGRAME 720
  721 IVHEQAQLER YMREAVKVSN ESPVLLDRFL NDALEVDVDA LSDGEDVIIG GIMEHVEQAG 780
  781 VHSGDSACSL PPYSLSPAMQ DELREQTVKM AKALGVVGLM NVQFAIQGET VYVLEVNPRA 840
  841 SRTVPFVSKA CGLQLAKIAA RCMTGRKLKA QGVTREVVPP YYSVKEAVFP FIKFPGVDTI 900
  901 LGPEMKSTGE VMGVGKTFAE AFVKSQLGSG TKLPKGGKAF ISVRREDRER VVEIAQALAG 960
  961 LGFKLVATRG TAGALTEAGL SVTPVNKVAE GRPHIVDMIK NGEISFIVNV TEDKRAVADS1020
 1021 YEIRRSALQQ KVTYYTTLAG AKAACIGMAH MQELEVQSLQ SLHKQLAQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle