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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|81168558, gi|...
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVTALSVES AAIAAAPSPP QPPRRRYRWD RRRYPRWQRS ADIWRFVLLL SFRLWLIQRP  60
   61 WTYFGGFSSD RQNQRRRKLA SWIRETCLDL GPTFIKVGQL FSTRADLFPA EYVEELSKLQ 120
  121 DQVPAFDLEQ VQQILSNELG ASPEELFSDF DPVPLAAASL GQVHRARLKT GEAVVVKVQR 180
  181 PGLQQLFTVD LAILRGIAEY FQRHRRWGQG RDWVGIYEEC CRILWQETDY LREGRNADRF 240
  241 RRDFRDCDWL LVPRVYWRYA SPRVLTLEYL PGIKISDYTA LEAANLDRQK ISQLNAEAYL 300
  301 RQVLNHGFFH ADPHPGNLAV SPTGRLIFYD FGMMGEIRTD VRSKLMQVFL GIARKDADDI 360
  361 VSALVELGAL LPTGDLGPVR RSVQYLLDNF LDRPFEGQSI SAISDDIYEI AYDQPFRFPA 420
  421 TFTFVMRAFS TLEGVGKGLD PDFNFMTVAK PYALEIMSDA TPNPAGLLNE FSRQALAVGN 480
  481 SALGLPRRLD DTLDKLEQGD LRVRVRASES DRLLRRLLLT QQSQTWAILT AALWIGSAIV 540
  541 SLSALPLLAI APFGLGLIPL GLLIRTQLRL RRSERMGNVS NN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle