YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45505355, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLHWLLSGT VGTVLLLSSP ALATRLNSWR FDANQNRLEI NTTGAVQPRA QLIFNPTRLV  60
   61 IDLPNVTFGR SQLTQPIGGR IRSVRVGQFD PQTTRIVVEV APGYTLDPQQ IKFVGLTASR 120
  121 WTVQLPTPTS EQAESSPDNT YNVVTIDSNT RPNLPNNTRP ELPNNTRPEF SDNTISAAPG 180
  181 TTQVEGLQVT GDGFFVRTSG GNPQVQVIRS RDRATIFMDI AGATLSPRAP RNIPVNKHGV 240
  241 NRVELTPLQT RTPSVRMTLR VDRNSPDWRA TSSNAGGLVV LPSRIVRLPN NDYSEGNTSN 300
  301 LPDRIPTTSA IATIESVDLS SNGTQLLIRA DQAVSGNSGW DRNTGLFRIT IPNAQLAPQV 360
  361 TGPSLNANSP ILRIRLQKQE PNTVVVLVQP AAGVQVGQLN KVGNQLLALQ LQGSRRLATT 420
  421 PPLPPIQGQL PDPSNPRPLP QPGTRPIPKG RLVVLIDPGH GGKDPGAIGI GGVREKDIIL 480
  481 PISQRIAEVL QQNGVQVVMA RNSDYFVSLP GRVQMAERVG ADVFVSIHAN SAGAGRPDVS 540
  541 GLETYYYDSG LSLARVVHSS ILRNVNVRDR GVRRARFYVL RKSSMPSILV ETGYLTGRDD 600
  601 AAKLRNSAYQ RQMADAIARG ILQYLKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle