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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75700193, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLDLSPLWI SLKTSLLATF ITFFLGIAAA YWMLSYRGKG KSLIEGIFVA PLILPPTVVG  60
   61 FLLLLFFGKN GPMGKLMGLF DFSIVFTWYG AAIAATIVSF PLMYKTSLGA FAQIDGNLLR 120
  121 VARTLGASES TIFWRISLPL AFPGIVAATM LSFARALGEF GATLMLAGNI PGQTQTIPMA 180
  181 IYFAVEAGAT NEAWFWAIMI MVISLSGILA VNLWQEVREK KGRGGQVKQT KGQGSEVVLL 240
  241 SAPASQVELL VDIEKHLPSF HLKVAFTTDE QPLGLLGGSG AGKSMILRCI AGIETPTRGR 300
  301 IVLNGRVLFD SEQGINLPSR DRRIGFLVQN YALFPHMTVA QNIAFGLPKK LSDNSMRVQV 360
  361 EEQLIAMQLQ GLGDRYPHQL SGGQQQRVAL ARALASQPEA LLLDEPFSAL DTHLRSQLEQ 420
  421 QMMETLTDYQ GVSLFVTHNM EEAYRICPNL LVLEDGSPVH YGSKYDIFEH PATVSVAQIT 480
  481 GCKNFSSAIV ESGQQIEAID WGCHLKVMEP IPQELSHIGI RAHQITFTND PNQENTFPCW 540
  541 LVRTNETPHR ITLFLKLHSP ASSPQDYHLQ AEVFKEKWLT IKEKPFPWYV HLDPLRLILM 600
  601 N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle