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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75703312, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLPGDSVI TQRYAQDMET NYSDKAYRWN RENYSSKRRF VDIWSFVLTL MFKLWRYNKS  60
   61 WSYPGGVTEA KQAARRKAQA VWIRNTLLDL GPTFIKVGQL FSTRADIFPG EYVEELAKLQ 120
  121 DKVPAFGYEQ VEKIVEQELG KKIPELFHSF EPIPLAAASL GQVHKAVLHS GESVVVKVQR 180
  181 PGLKKLFEID LRILKGIARY FQSHPKWGRG RDWMGIYEEC CRILWEEIDY LNEGRNADTF 240
  241 RRNFRGYEWV KVPKVYWRYA SPRVLTLEYL PGIKISQYEA IEAAGLDRKV LARQGAQAYL 300
  301 LQLLNNGFFH ADPHPGNIAV SADGALIFYD FGMMGQIKSN IREGLMQTLF GIAQKDGDRV 360
  361 VQSLIDLGAI APVDDMGPVR RSVQYMLDNF MDKPFENQSV AAISDDLYEI AYNQPFRFPA 420
  421 TFTFVMRAFS TLEGVGKGLD PEFNFMEVAQ PYAMQLMTDM NGSDSNSFLN ELSRQAVQVS 480
  481 TTAFGLPRRL EDTLEKLERG DMRLRVRSIE SERLLRRQGN IQIGIGYALI ISGFTLSATI 540
  541 LLVNHYVWLA LLAGLIAAAV SVMLIRLLLR LDRYDRMY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle