YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MTNA_ANAVT
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYPVIWQNN CVLLIDQTRL PNEYAVVEIH RSEEMARAIQ TMIVRGAPAI GVAAAYGMYL  60
   61 GAREIETSER QEFLQKLEKV AQLLRATRPT AVNLFWAISR MLKTAYETLG TVAQIKENLL 120
  121 QTAQAINAED LQTCQVIGDN GLAILPKTPT KLTLLTHCNA GALATAGYGT ALGVVRSAWR 180
  181 EGRLERLFAD ETRPRLQGAK LTTWECVQEG IPVTLITDNM AAHCMKQGLI DAVVVGADRI 240
  241 AANGDAANKI GTYSLAIVAK AHNVPFFVAA PVSTIDFELT DGSQIPIEER NPVEIYQVGD 300
  301 TTLTPPGVEF YNPAFDVTPA ELITAIITEN GAFAPCDLTK SSKQAVV

Type	Start	End	Confidence
Cytoplasmic	1	40	0.78
Transmembrane Helix	41	62	0.73
Non-Cytoplasmic	63	347	0.95