YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45915456, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVEHNGERR RVWLLLAFSV PVLLILLALG TWQVQRLHWK EDLLARIDER IASEPVPLDE  60
   61 ISSVYERGGD VDYRPVVLSG TFLHERERHY LATWEGQSGF FVHTPLRLGN GRYIFVNRGF 120
  121 VPYDRKDPAV RQQGQVGGEI AIVGLARAAP AQKPSFLVPD NDLAKNIFYW KDLGAMTASA 180
  181 GLDASETYPF YVDAGDAPNP GGLPVGGVTL INLPNNHLQY ALTWYGLAFA LVCVLVVWFR 240
  241 RGRNGGREQA

Type	Start	End	Confidence
Cytoplasmic	1	11	0.76
Transmembrane Helix	12	32	0.76
Non-Cytoplasmic	33	219	0.98
Transmembrane Helix	220	239	0.95
Cytoplasmic	240	250	0.91