YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67533452, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIFFIAALS AQIQSTGTAL KLLPAGEFRA RDGRPTECAA WRLDATGAER LIAAANARQT  60
   61 RYVIDYEHQT LNSAKNGQPA PAAAWFKTLE WREGDGLYAI DVQWTARASA MIDADEYAYL 120
  121 SPVFAFDKAG NVTALLNAAL TNDPALDCLD EVQLTAACSA MSSVIGSAAH AALSSVPPTE 180
  181 ASNMNELLER LQWLLNLPVG ATAEDITAQL NKLIDMLSDG QGTAAASANL PVLLESQRAQ 240
  241 IATLSANQVD PARFVPISVM TDLRAQLDAA NAKLTGNEVE ELVTAALKNG RLLPAQENWA 300
  301 RDLGKSNVAA LKQFVATAQP IQALGGTQTG GNPPTDDKTG AALSAEDLAV CKALGLDPAT 360
  361 YKTSQPAA

Type	Start	End	Confidence
Signal Peptide	1	19	0.85
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	368	0.99