YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47573799
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLPKPPAKK ASLLSASDFD SQAAPKPGTR ATKQDNPGPA LLDLFDPHPK APAAKAPAPA  60
   61 PAATPRAVQA PAAGYLPVKA ISRGTATEPR PRKPRASGPP KLFVLDTNVL MHDPMSLFRF 120
  121 DEHDVYLPMI TLEELDGHKK GMSEVSRNVR QVSRELDALA GGADSAKFDP AAGVALAKTG 180
  181 HKEAGGTLFF QTTFLDAKLP AGLPQGKADN QILGVVQGLR EQHPTRDVVL VSKDINMRIK 240
  241 ARALGLPAED YFNDKTLEDG DLLYTGVLPL PADFWERHGK TMESWQQGGS TFYRIAGPLV 300
  301 PVLMVNQFVY LETPGAAPLY AKVTEITGKT AVLKTLKDYS HAKNAIWGVT ARNREQNFAL 360
  361 NLLMDPDCDF ITLTGTAGTG KTLMTLAAGL SQVMDDRRYS EIIVTRVTVP VGEDIGFLPG 420
  421 TEEEKMGPWM GALDDNLEVL SKNDSGAGEW GRAATNDLVR SKIKIKSLNF MRGRTFLNKF 480
  481 VLIDEAQNLT PKQMKTLITR AGPGTKIVCL GNLAQIDTPY LTEGSSGLTF AVDRFKGWPH 540
  541 SGHVMLARGE RSRLADYASD VL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle