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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: UDB18_MACFA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVKWTSVIL LIQLSFYFSS GSCGKVLVWA AEYSHWMNMK TILEELVQRG HEVTVLASSA  60
   61 SILFDPNNSS ALKIEVFPTS LTKTEFENII RQQIKRWSEL PKDTFWLYFS QMQEIMWKFG 120
  121 DITRNFCKDV VSNKKLMKKL QKSRFDVVFA DAIFPCSELL AELLNTPLVY SLRFTPGYNF 180
  181 EKHCGGFLFP PSYVPVVMSE LSDHMTFMER VKNMIYMLYF DFCFQIYAMK KWDQFYSEVL 240
  241 GRPTTLSETM GKADIWLIRN SWNFQFPHPL LPNVDFVGGL HCKPAKPLPK EMEEFVQSSG 300
  301 ENGVVVFSLG SMVTNMKEER ANVIASALAQ IPQKVLWRFD GKKPDTLGLN TRLYKWIPQN 360
  361 DLLGHPKTRA FITHGGSNGI YEAIYHGVPM VGIPLFADQP DNIAHMKAKG AAVRLDFDTM 420
  421 SSTDLVNALK TVINDPLYKE NVMKLSRIQH DQPVKPLDRA VFWIEFVMRH KGAKHLRPAA 480
  481 HDLTWFQYHS LDVIGFLLAC VATVIFIIMK CCLFCFWKFA RKGKKGKSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle