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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7434437, gi|4...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLLRTILLI IISIHFKLAH ADQVVLLDTT REATLEWTRY PYGPQAQTPG WVEESFTDFV  60
   61 KGINWRSYVV CDVAYHNVNN WLWSPFIDRG SANRLYIEIQ FTIRDCSLFP GNALSCKETF 120
  121 SLLFYEFDAA TREPPPWQTD SYRLIARIAA GEGRFNQNSD VDINTEVKSI AVNKKGVYFA 180
  181 FRVQGACISV LAVKVYYITC PAVTENFAHF NETPTGREIT IIEKQNGTCV DNAEGYETPT 240
  241 YLCKGDGKWT ILTGGCRCKA GYEPNYTNKT CTECPLGTFK SPEVTKCTPC PPNSNASKTG 300
  301 SPFCKCASGY YRHPNDGRHM PCYSPPAAPT NLTLLFVDQT SAIISWSAPA KNESFSSETN 360
  361 SKIYHSDILY KIKCNICSPN VVYNPSTDTF NETKITLTNL EPVTTYTVQI HAINSVSHIN 420
  421 EFKRHSNESS LVAVSDIVFS NTSLLNIPLD LNEVKTGQAE IVFTTESVLL STVFNLRILA 480
  481 ITNKDADLEW DKPVQSDFPL EFYEVRWFPK VELDAINKSA LNTKETKAHI VGLLENTEYG 540
  541 FQVRCKTNNG FGSYSNMIYA QTLQSVGSVY DDSVQIRFIA GAMLTGVLFL VIFIIATVYF 600
  601 MRSKHQDDLD KKCTNHLPLP LDYASNEVNS MDTTPIVKKL HLNVTTPLFG NSRSYVDPHT 660
  661 YEDPNQAIRE FAREIDANYI TIEAIIGGGE FGDVCRGRLK IPPNFVQDID VAIKTLKPGS 720
  721 SEKARCDFLT EASIMGHFDH PNVIYLQGVV TRSNPVMIIT EYMENGSLDT FLRVNDGKFE 780
  781 TLQLIVMLRG IASGMSYLSD MNYVHRDLAA RNVLVNAQLI CKIADFGLSR EIENASDAYT 840
  841 TRGGKIPVRW TAPEAIAFRK FTSASDVWSY GVVLWEVMSY GERPYWNWSN QDVIKSIEKG 900
  901 LGLPAPMDCP EALYQLMLDC WQKQRTHRPT FASIVSTLDN LARQPQSLLT TRPSPESDGN 960
  961 HILDGQRGQI FFISTDLWLE HIKMSRYCHH FKEANLINAQ QVNSSNYHFC INQFFIVKY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle