YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4097231
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLKNKKFW AITLGVTLVG AGVVAVAASC SSSNVKSKLS SQLVKSKDEK SFYAVYDIEN  60
   61 FDDLNENDKK ALNEAEFNVA ITSAENKTEN ATTKGHLLNK KIYVKLPREP KAKEQLTIIN 120
  121 KGGLLKTASL VLPDNLNYQT ENIGFETQPG SGSTTQPGSG STTQPGSGST TQPGSGSTTQ 180
  181 PGSGSTTQPG SGSTTQPGSG STTQPGSGST TQPGSGSTTQ PGSGSTTQPG SGSTTQPGSG 240
  241 STTQPGSGST TQPGSGSTTQ PGSGSTTQPG SGSTTQPGSG STTQPGSGST TQPGSGSTTQ 300
  301 PGSGSTTQPG SGSTTQPGSG STTQPGSGST TQPGSGSTTQ PGSGSTTQPG SGSTTQPGSG 360
  361 STTQPGSGST TQPGSGSTTQ PGSGSTTQPG SGSTTQPGSG STTQPGSGST TQPGSGSTTQ 420
  421 PGSGSTTQPG SGSTTQPGSG STTQPGSGST TQPGSGSTTQ PGSGSTTQPG SGSTTQPGSG 480
  481 STTQPGR

Type	Start	End	Confidence
Signal Peptide	1	27	0.97
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	487	0.99