YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45825852
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQILLCSQI LLLFFAVANC DGEHQLDSSM DLKSDSTKSA VLKNVAPKND ATQAEIAKDD  60
   61 VALKSGKKGD YVMDIDVSDM PLDDYPINNS KSRKNSSTLP SQILTDKTNQ GSNQIALKAL 120
  121 KHRLLMEQNN NLFLRNHSVS LMNEIEARKT DIIQARQLNI DLELELEALK RKLSEMNEQN 180
  181 ARKPTKSCKK RPSKDIAPPG NQLQEVIVKN TYRNKYLTLL TQLAQKINYE IANVNNPATD 240
  241 VPTGKSPSEG NPSTT

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	255	0.99