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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4769012
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATNPGLFTE WPWKKLGSFK YVLLAPWVAH GWYEVATKGR REVDLGYIAI LPSLLLRMLH  60
   61 NQAWITISRL QNARGRRQIV RRGIEFDQVD RERNWDDQII LSGILLYLGA LYVPGGQHLP 120
  121 LWRTDGAGLI ALLHAGPVEF LYYWFHRALH HHFLYTRYHS HHHSSIVTEP ITSVIHPFAE 180
  181 LVAYELLFSI PLIACALTGT ASIIAFEMYL IYIDFMNNMG HCNFELVPSW LFTWFPPLKY 240
  241 LMYTPSFHSL HHTQFRTNYS LFMPFYDYIY NTMDKSSDTL YENSLKNNDE EEAVDVVHLT 300
  301 HLTTLHSIYH MRPGFAEFAS RPYVSRWYMR MMWPLSWLSM VLTWTYGSSF TVERNVMRDQ 360
  361 DAVMGHYQDT SFHYGLDWEK EAINDLIEKA VCEADKNGAK VVSLGLLNQA HTLNKSGEQY 420
  421 LLKYPKLGAR IVDGTSLAAA VVVNSIPQGT DQVILAGNVS KVARAVAQAL CKKNIKVTMT 480
  481 NKQDYHLLKP EIPETVADNL SFSKTGTAKV WLIGDGLDSA EQFRAQKGTL FIPYSQFPPK 540
  541 MVRKDSCSYS TTPAIGCTKN AAECAFMREL AAKEGYGRMA NGGNSSCVGG WNEHECGDKV 600
  601 LGMAKVWTDT IEHGLCPVDQ G

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle