YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3925488
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSLIALTL AALPVAAMAD VTLYGTIKAG VETSRSVSHH EAQADRVKTA TEIADLGSKI  60
   61 GFKGQEDLGN GLKAIWQLEQ KAYVSGTLEG WGNRQSFIGL KGGFGKVRVG RLNSVLKDTG 120
  121 GFNPWEGKSY YLGLSNIAQP EERHVSVRYD SPEFAGFSGS VQYVPNDNSG KNHSESYHAG 180
  181 FNYKNSGFFV QYAGFYKRHS YTTEKHQVHR LVGGYDHDAL YASVAVQQQD AKLTWRNDNS 240
  241 HNSQTEVAAT AAYRFGNVTP RVSYAHGFKG SVYDADNDNT YDQVVVGAEY DFSKRTSALV 300
  301 SAGWLQRGKG TEKFVATVGG VGLRHKF

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	327	0.99