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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3478637
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGSSLWLSL TFRSARVLSR ARFFEWQSPG LPNTAAMENG TGPYGEERPR EVQETTVTEG  60
   61 AAKIAFPSAN EVFYNPVQEF NRDLTCAVIT EFARIQLGAK GIQIKVPGEK DTQKVVVDLS 120
  121 EQEEEKVELK ESENLASGDQ PRTAAVGEIC EEGLHVLEGL AASGLRSIRF ALEVPGLRSV 180
  181 VANDASTRAV DLIRRNVQLN DVAHLVQPSQ ADARMLMYQH QRVSERFDVI DLDPYGSPAT 240
  241 FLDAAVQAVS EGGLLCVTCT DMAVLAGNSG ETCYSKYGAM ALKSRACHEM ALRIVLHSLD 300
  301 LRANCYQRFV VPLLSISADF YVRVFVRVFT GQAKVKASAS KQALVFQCVG CGAFHLQRLG 360
  361 KASGVPSGRA KFSAACGPPV TPECEHCGQR HQLGGPMWAE PIHDLDFVGR VLEAVSANPG 420
  421 RFHTSERIRG VLSVITEELP DVPLYYTLDQ LSSTIHCNTP SLLQLRSALL HADFRVSLSH 480
  481 ACKNAVKTDA PASALWDIMQ KECPVKRERL SETSPAFRIL SVEPRLQANF TIREDANPSS 540
  541 RQRGLKRFQA NPEANWGPRP RARPGGKAAD EAMEERRRLL QNKRKEPPED VAQRAARLKT 600
  601 FPCKRFKEGT CQRGDQCCYS HSPPTPRVSA DAAPDCPETS NQTPPGPGAA AGPGID

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle