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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9651943
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKMRVLFVF LFFHFHFPET LSAPISEYRA LLSLRSVITD ATPPVLSSWN ASIPYCSWLG  60
   61 VTCDNRRHVT ALNLTGLDLS GTLSADVAHL PFLSNLSLAA NKFSGPIPPS LSALSGLRYL 120
  121 NLSNNVFNET FPSELWRLQS LEVLDLYNNN MTGVLPLAVA QMQNLRHLHL GGNFFSGQIP 180
  181 PEYGRWQRLQ YLAVSGNELD GTIPPEIGNL TSLRELYIGY YNTYTGGIPP EIGNLSELVR 240
  241 LDVAYCALSG EIPAALGKLQ KLDTLFLQVN ALSGSLTPEL GNLKSLKSMD LSNNMLSGEI 300
  301 PASFGELKNI TLLNLFRNKL HGAIPEFIGE LPALEVVQLW ENNLTGSIPE GLGKNGRLNL 360
  361 VDLSSNKLTG TLPPYLCSGN TLQTLITLGN FLFGPIPESL GTCESLTRIR MGENFLNGSI 420
  421 PKGLFGLPKL TQVELQDNYL SGEFPEVGSV AVNLGQITLS NNQLSGALSP SIGNFSSVQK 480
  481 LLLDGNMFTG RIPTQIGRLQ QLSKIDFSGN KFSGPIAPEI SQCKLLTFLD LSRNELSGDI 540
  541 PNEITGMRIL NYLNLSKNHL VGSIPSSISS MQSLTSVDFS YNNLSGLVPG TGQFSYFNYT 600
  601 SFLGNPDLCG PYLGACKGGV ANGAHQPHVK GLSSSLKLLL VVGLLLCSIA FAVAAIFKAR 660
  661 SLKKASEARA WKLTAFQRLD FTVDDVLHCL KEDNIIGKGG AGIVYKGAMP NGDHVAVKRL 720
  721 PAMSRGSSHD HGFNAEIQTL GRIRHRHIVR LLGFCSNHET NLLVYEYMPN GSLGEVLHGK 780
  781 KGGHLHWDTR YKIAVEAAKG LCYLHHDCSP LIVHRDVKSN NILLDSNHEA HVADFGLAKF 840
  841 LQDSGTSECM SAIAGSYGYI APEYAYTLKV DEKSDVYSFG VVLLELITGR KPVGEFGDGV 900
  901 DIVQWVRKMT DSNKEGVLKV LDPRLPSVPL HEVMHVFYVA MLCVEEQAVE RPTMREVVQI 960
  961 LTELPKPPGS KEGDLTITES SLSSSNALES PSSASKEDQN PPQSPPPDLL SI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle