YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6856550
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSIRINPLY SIFSTTTKTL SASCSSPAVH LQQRCRTLSI SSSITNSPRR GLNRLFASTS  60
   61 TMGEVADAGM DAVQKRLMFD DECILVDEND KVVGHDSKYN CHLMEKIEAE NLLHRAFSVF 120
  121 LFNSKYELLL QQRSATKVTF PLVWTNTCCS HPLFRDSELI EENFLGVRNA AQRKLLDELG 180
  181 IPAEDVPVDE FTPLGRILYK APSDGKWGEH ELDYLLFIVR DVKYDPNPDE VADAKYVNRE 240
  241 ELKEILRKAD AGEEGIKLSP WFRLVVDNFL FKWWDHVEEG KIKDVADMKT IHKLT

Type	Start	End	Confidence
Signal Peptide	1	24	0.57
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	295	0.99