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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6093316
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFAEHLSAH ITPEWRKQYI QYEAFKDMLY SAQDQAPSVE VTDEDTVKRY FAKFEEKFFQ  60
   61 TCEKELAKIN TFYSEKLAEA QRRFATLQNE LQSSLDAQKE STGVTTLRQR RMPVFHLSHE 120
  121 ERVQHRNIKD LKLAFSEFYL SLILLQNYQN LNFTEFRKIL KKHDKILETS RGADWRVAHV 180
  181 EVAPFYTCKK INQLISETEA VVTNELEDGD PQKAMKRLRV PSLGAAQPAP AWTTFRVGLF 240
  241 CGIFIVLNIT LVLAAVFKLE TDRSIWPLIR IYRGGFLLIE FLFLLGINTY GWRQAGVNHV 300
  301 LIFELNPRNN LSHQHLFEIA GFLGILWCLS LLACFFAPIS VIPTYVYPLV LYGFMVFFLI 360
  361 NPTKTFYYKS RFWLLKLLFR VFTAPFHKVG FADFWLADQL NSLSVILMDL EYMICFYSFE 420
  421 LKWDESGGLL PNNSEEPEIC HKYSYGVRAI VQCVPAWLRF IQCLRRYRDT KRAFPHLVNA 480
  481 GKYSTTFFTV TFAALYSTHK ERGHSDTMVF FYLWIVFCII SSCYTLIWDL KMDWGLFDKN 540
  541 AGENTFLREE IVYPQRAYYY CTIIEDVILR FAWTVQISIT SMTLLPHSGD IIATVFAPLE 600
  601 VFRRFVWNFF RLENEHLNNC GEFRAVRDIS VAPLNADDQT LLEQMMDQDD GVRDRQKNRP 660
  661 WKYSQSISLR RPRLASQSKA RDTKVLIEDT DDEANT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle