YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3747093
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANRRSLFSL SLIFVFMINS AIATPVTYNV ASLGAKADGK TDSTKAFLSA WAKACASMNP  60
   61 GVIYVPAGTF FLRDVVFSGP CKNNAITFRI AGTLVAPSDY RVIGNAANWI FFHHVNGVTI 120
  121 SGGILDGQGT ALWACKASHG ESCPSGATTL GFSDSNNIVV SGLASLNSQM FHIVINDCQN 180
  181 VQMQGVRVSA SGNSPNTDGI HVQMSSGVTI LNSKIATGDD CVSIGPGTSN LWIEGVACGP 240
  241 GHGISIGSLG KEQEEAGVQN VTVKTVTFTG TQNGLRIKSW GRPSTGFARN ILFQHATMVN 300
  301 VENPIVIDQH YCPDNKGCPG QVSGVQISDV TYEDIHGTSA TEVAVKFDCS PKHPCSEIKL 360
  361 EDVKLTYKNQ AAESSCSHAD GTTEGVVQPT SCL

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	393	0.99