YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6630989
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKSICSTGL RWLWVVVAVL IIDLGSKFLI LQNFALGETV PLFPSLNLHY ARNYGAAFSF  60
   61 LADSGGWQRW FFSGIAIGIC VVLTVLMYRS KATQKLNNIA YALIIGGALG NLFDRLWHGF 120
  121 VVDMIDFYVG DWHFATFNLA DSAICIGARL IVLEGFLPKP TVKEQA

Type	Start	End	Confidence
Cytoplasmic	1	9	0.96
Transmembrane Helix	10	31	0.91
Non-Cytoplasmic	32	66	0.95
Transmembrane Helix	67	88	0.91
Cytoplasmic	89	97	0.86
Transmembrane Helix	98	117	0.92
Non-Cytoplasmic	118	133	0.85
Transmembrane Helix	134	153	0.91
Cytoplasmic	154	166	0.90